Professional cyclist dies in his sleep

As the UK  and international cycling season begins to swing into action, it's also the time that my blog articles on cycling will start to reappear (see also the Team Grumpy blog).

Some really quite sad news from the recently completed Tour of Qatar cycling stage race this week: one of the riders (Frederiek Nolf, of Team Topsport Vlaanderen-Mercator) died in his sleep, just five days short of his 22nd birthday.  The newsflash at cyclingnews.com (Belgian rider passes away in Qatar) was published on 5th February: the following stage was neutralised out of respect.

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Entry forms for the 2009 time trialling season

For the last few seasons, my availability for training has declined steadily.  This, coupled with the passing years, means that each year when I start reviewing past performances for completing CTT entry forms for the coming season, I find it a little depressing.  This season is no exception.

But at least the Cycling Time Trials website back again after yet another SQL injection attack, this time using a different platform.  Hopefully this'll be more secure.  Actually, I think it would look a lot better without all the flashing, moving adverts, but perhaps that's just me being a grumpy old man (and anyway, as a Firefox user, I can always use the AdBlock plug-in).

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In the Journals - Chemical evidence of multicellular life 635 million years ago

A paper in the current issue of Nature [Love et al (2009) Nature 457; 718-722] suggests that multicellular life existed about 100 million years before the explosion of bilaterian animals in the Cambrian. The evidence comes from analysis of rocks from the Arabian peninsula, in which geologically preserved derivatives of characteristic chemicals have been detected. Now, this paper interested me because of its message concerning the dating of the origins of multicellular life; I am not a geologist or a chemist, so many of the details escape me.

Identification of the presence of soft bodied animal in the fossil record is always difficult: it's generally the hard parts of the animal that are preserved by fossilisation (there are exceptions). The Cambrian explosion (see timeline diagram- click on it to link to the interactive Wikipedia diagram) resulted in a wide variety of animal forms: what's less clear is from where this abundance of diverse forms arose. This paper takes chemical approach to establishing the presence of animal remains in rock samples.

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Thank you, Andrew Wakefield

The BBC reports that UK measles rates continue to rise (Rise in measles 'very worrying'), in response to falling levels of MMR vaccination.  The downward trend in MMR vaccination followed Andrew Wakefield's claims that there is a link between MMR vaccination and autism. That the British public continue to believe there is a link between MMR vaccination and autism, despite the many investigations that have disproved it is really very sad.

Ben Goldacre has written extensively on the culpability of the media in propagating the scare stories that have resulted in this appalling situation.  Recently he blogged about a highly irresponsible LCB  radio broadcast in which Jeni Barnett continued to push distorted and inaccurate information on the supposed dangers of vaccination. Today he reports that LCB have launched lawyers at him, on the grounds that his posting mp3 recordings of that segment of the radio show breaches copyright (he promptly removed the link from his website).  Too late, I fear, the recording has begun to proliferate on the internet (see Streisand Effect).  Now, it's made it to Wikileaks, so I guess it's out there to stay.  And I hear that transcripts are being prepared for release.

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BBC to stop using Omniture to track UK visitors to its website

The BBC has announced that it's no longer using the US-based company Omniture to track the browsing habits of visitors to its website (see earlier blog post - BBC gifting private data to a USA-based company).  Well, at least for UK based visitors - those in the rest of the world will still be tracked.

Source - nodpi.org forum posting

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SCO make sense at last, sorta

For those of us who've been following ill-fated and badly led software company SCO's ill-judged crusade against Linux (see Groklaw for a full history), The Register has an amusing story (SCO boss to customers: 'Blah. Blah. Blah') - pointing out that SCO's website features a rather bizarre message from Company President Jeff Hunsaker.

Just in case SCO wake up to this cockup, those cheeky chaps at El Reg have saved a copy.

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There's probably no teapot

Been a bit busy over at Wonderful Life, and at work this week to maintain the accelerating pace of blogging.  Here's an amusing little website animation for your amusement.  Thanks to the excellent PZMyers for the headsup.

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A question of responsibility

The Register has published an update to yet another legal action against Google, this time in Italy - "Google on trial over Italian 'defamation' vid".  Some background:

In September 2006, someone posted a three-minute cell-phone video to Google's Italian website in which four Turin teenagers make fun of a classmate with Down's Syndrome. And in July, after two years of investigation, Italian authorities filed criminal charges against four Google execs: chief legal officer David Drummond, chief privacy officer Peter Fleischer, an unnamed London-based video exec, and chief financial officer George Reyes, who has since left the company.

What's interesting is that within a day of a complaint about this video reaching YouTube, the viseo was taken down.  So where does the responsibility here lie?  I suggest the perpetrators of the bullying, and those who posted the video are the villains of the piece, not Google executives or YouTube operatives.

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Fossil foetal (proto-)whale

Quite a few of the bloggers at ScienceBlogs have been writing about an exciting new fossil find: a newly discovered fossil ancestor of whales.  The exciting thing here is that the fossil contains the remains of foetal whales.  Here's the University of Michigan podcast.

The fossil confirms that Maiacetus inuus was amphibious, or at least gave birth on land, as the foetus is oriented to emerge head-first (clearly not adaptive for aquatic birth, and something not seen in present-day cetaceans).

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In the Journals - Human expansion across the Pacific mapped by language and bacteria

Just as I finish reading (or rather, re-reading) chapters concerning the fate of Easter Island (Rapanui) and of Henderson and Pitcairn Islands in Collapse: How Societies Choose to Fail or Survive by Jared Diamond, the 23rd January issue of Science arrives, bearing two articles on the spread of humans (Austronesians) from Taiwan and onwards across Micronesia to Polynesia.  One of these papers, by Gray and colleagues, presents a linguistic analysis of langauages across this region.  The second, by Moodley et al looks at the variation of the human pathogen Helicobacter pylori in these same peoples.  Both strands of evidence documenting this population spread are in striking agreement.

I have no experience in the kind of linguistic analysis carried out by Gray and colleagues, so my understanding is informed by Colin Renfrew's Perspectives article in this issue of Science.There are over 1000 polynesian languages, making it one of the largest language families.  Ultimately, the populations that eventually colonised even the most remote islands such as Easter were ultimately derived from a migration that can (at least in one theory) be traced back to origins in Taiwan (upper panel in the figure below).  Other possibilities include origins in island Southeast Asia.  Genetic evidence (such as that provided by mitochondrial DNA sequences) has been ahrd to interpret, and may not support the Taiwan origin of the Austronesian speaking people.  On the other hand, such evidence may be complicated by post-colonial gene flow.

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More UK Government data loss

A recurring theme in this blog is not just that the Government seems determined to trample over the data protection rights of the UK population, but that they are singularly inept at ensuring that the state machinery treats various data sources in a careful and secure manner.

From databases left on trains, to stolen laptops contaning databases of personal data, I (and I guess many others) view Wacky Jacqui's upcoming Uber-database that will be made possible by a combination of databases (including the vile IMP comms database and that of the ridiculous ID card scheme) using the "interesting" clause 152 of the Coroners and Justice Bill Part 8 - Data Protection Act 1998 (c. 29).  This empowers Ministers to direct the linkage of diferent databases.

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The resurrected Pyrenean ibex - anyone spot the problem?

According to the Daily Telegraph, a team of scientists (we're always "teams") have cloned an extinct Spanish mountain goat from DNA contained in frozen skin samples from the last known specimen, aand using domestic goat eggs.

The article, Extinct ibex is resurrected by cloning,saysthat

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Another UK Government data disaster waiting to happen

The BBC reports that the upcoming ContactPoint database which is planned (at a cost of £224 million) to contain contact details of all kids under 18 years old in England is expected to be accessible to 390,000 users.  I guess more still when it gets lost in the post or left on a train.  The database will

hold the name, address, parents' contact details, date of birth, school and doctor of every child in England.

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Abuse of the Regulation of Investigatory Powers Act

An interesting report on the BBC website on the use and abuse of RIPA.  It would appear that local councils are always ready to use RIPA to keep an eye on their citizens.

Figures obtained by BBC Radio Lincolnshire show that local councils have used covert surveillance authorisations 217 times in the last three years.

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Darwin 200 - Damian Hirst on Damian Hirst's 'Origins' cover

A short article at the Guardian (Damien Hirst salutes Darwin's 'courage' in On the Origin of Species painting) initially passed me by.  It's by Hirst himself, and he says nice things about Darwin.  Apparently the painting is called ""Human skull in space", but while I quite like it, it's still not clear to me how it relates to the book.  Even after reading what Hirst has to say about it!

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Microsoft Internet Explorer 8 nears release, is astroturfed

Quite a few postings on internet tech sites tell us that the new MS browser, IE 8, is nearing release.  The Register tells us that the marketing strategy seems to involve MS employees being asked to send out enthusiastic emails to to 10 friends each, in a sort of chain letter style.

This isn't of much direct impact to me as a Linux user, but I am amused by its reported dual function mode: the default mode being adherence to web standards, and a "compatibility mode" that will work with all those websites that were built for use with earlier non-standards-adhering versions of IE.  So, I suppose that's progress of sorts. 

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Darwin 200 - Damian Hirst's 'Origins' cover

The new Peguin Books' edition of Darwin's On the Origin of Species... features a cover by celebrated/reviled (dependent on one's opinion!) modern artist Damian Hirst. Now, while I quite like some (but not all) of Hirst's work - and recall I am no art aficionado, this cover seems a little odd to my tender eyes - a little like a cross between Francis Bacon's Pope paintings and something from Tim Burton's ghoulish animations. Still, it makes a nice change from pictures of heavily bearded Charles Darwin, or of finches etc.

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UK Government Data Sharing - Privacy International

Privacy International have issued a report on how the Coroners and Justice Bill Part 8 - Data Protection Act 1998 (c. 29) will impact on data protection in the UK, and it makes for depressing reading.

Clause 152 of the Bill will permit an almost limitless range of data sharing pportunities both within government and between commercial organisations[...]

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Darwin 200 - Popular science writing

There's been a bit of a rumpus echoing through the blogosphere following a series of pop sci articles about Darwin and his legacy (see for example this review of recent stories).  Generally, and presumably to attract readers, many make some kind of provocative claim in the title, such as "Was Darwin wrong?" or similar.

In contrast, the February 2009 edition of National Geographic features a rather excellent article by Matt Ridley: Darwin's Legacy. In a refreshing change from the tabloid-style hatchet jobs often seen in the press, this is a measured view of how modern biology has built on Darwin's foundations, and quite responsibly points out that Darwin, for all his breadth of knowledge never knew the physical basis for inheritance.

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Border Guards vs Drosophila, part 3

The latest in the ongoing saga of our fly shipment from the USA is that our packet of flies finally made it to the lab.  They've been in transit for exactly three weeks*, and of course kept in in known conditions.  I'm very grateful to various people at Animal Health, who were able to make an exception to the regulations.

Nonetheless, I think the application of tight control of over the international transport of live insects such as these is a bit over the top - the legislation that I've looked through seems principally aimed at commercially important farm stock and other animals important to the human food chain.   I understand there's a general unhappiness in the UK Drosophila research community, especially since the international postal union recently relaxed its regulations regarding the transport of live Drosophila through regular mail.  I'm not particularly optimistic that we can make a change to the enforcement of the new regulations, but it's most definitely worth a try.

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