There's been a bit of a rumpus echoing through the blogosphere following a series of pop sci articles about Darwin and his legacy (see for example this review of recent stories).  Generally, and presumably to attract readers, many make some kind of provocative claim in the title, such as "Was Darwin wrong?" or similar.

In contrast, the February 2009 edition of National Geographic features a rather excellent article by Matt Ridley: Darwin's Legacy. In a refreshing change from the tabloid-style hatchet jobs often seen in the press, this is a measured view of how modern biology has built on Darwin's foundations, and quite responsibly points out that Darwin, for all his breadth of knowledge never knew the physical basis for inheritance.

The latest in the ongoing saga of our fly shipment from the USA is that our packet of flies finally made it to the lab.  They've been in transit for exactly three weeks*, and of course kept in in known conditions.  I'm very grateful to various people at Animal Health, who were able to make an exception to the regulations.

Nonetheless, I think the application of tight control of over the international transport of live insects such as these is a bit over the top - the legislation that I've looked through seems principally aimed at commercially important farm stock and other animals important to the human food chain.   I understand there's a general unhappiness in the UK Drosophila research community, especially since the international postal union recently relaxed its regulations regarding the transport of live Drosophila through regular mail.  I'm not particularly optimistic that we can make a change to the enforcement of the new regulations, but it's most definitely worth a try.

Well, it looks as though 2009 will be the year I finally start to do this "social networking" thing for real.  I've been running this website for a few years now - originally set up to host my genealogy work for my family, it became something a bit more interesting when I embarked upon the Joomla! journey.  My first Joomla! site was the revision of my plain html North Bucks Road Club website using Joomla!1.0. I then reworked  this website using a release candidate of Joomla! 1.5.x, and subsequently set up a website for a conference in Oxford that I helped organise (this site has been removed as it's no longer needed).

This site has been upgraded to Joomla! 1.5.9. The initial upgrade from the release candidate to the final release version in summer 2008 was a disaster, and I had to rebuild it from a saved sql file. At that point, I switched to MyBlog to handle the front page.  I've also started using an extension that permits finer granularity in user groups, so that selected users can collaborate on documents, such as wikis.

The UK Government's plans to assemble a joined up database state appear to be drawing closer.  In the rather innocuous sounding Coroners and Justice Bill Part 8 - Data Protection Act 1998 (c. 29) lies an interesting clause, 152, in which the government empowers itself to authorise largely unlimited data sharing.

The bill's summary is as follows (my emphasis - at least it flags up the change that interests me):

There's been a profusion of articles in the popular press as he big Darwin anniversary swings into top gear.  Many of these make over-stated cases that Darwin's theory of evolution by natural selection has been "shaken up", or "over-thrown" (see for example this blog post).

There's another at the Daily Telegraph today: Charles Darwin's tree of life is 'wrong and misleading', claim scientists. Setting aside the obvious point that Darwin couldn't have got all the details right given the scientific knowledge of the time, the article seems to restate the popular myth of the big icon of evolution - the diagram of evolutionary relationship as an oak tree:

Now that President Obama's in the White House, he's rolling out changes - closing Guantanamo Bay, permitting Federal funding for agencies that publicise abortion, and now enabling Federal funding for stem cell research.

Perhaps related to the thaw in stem cell research, the US Food and Drug Administration has approved a proposal aimed at investigating the use of embryonic stem cell therapy in spinal injury (BBC News).  The proposal, from Geron Corp., has been approved.

So, it seems the old farts at the Met don't want kids to have much fun these days.  Apparently, every live music event needs to be "risk assessed", which involves completing a form 696, while afterwards you need to complete a form 696A. It's claimed that

Sunny Hundal writes in the Guardian's "Comment is free" about his experiences.  Before he and other fun-lovers could get into the venue, a variety information were gathered, with no indication of why the data were collected, nor how long it would be held for.

The Wordpress blog I described the other day has been fully launched - Wonderful Life - and is hosted here rather than at Wordpress.com.  I wanted to be able to do some css tweaking, and that proved a bit easier I installed it in my own domain.  I'm rather pleased with the clean and uncluttered layout of the template I chose.

I've entitled the blog Wonderful Life because it's the sense of wonder and excitement I gain from observing and explaining the world around me that motivates me as a biologist.  It's a forum for me to sound off on atheism and related matters.  Of course, it remains to be seen whether I keep it (the blog, I mean, not my biology!) rolling after the initial excitement.  And of course this blog will still be needing attention, as does the Team Grumpy blog (though that's more of a joint effort). 

Another broadsheet blogger rails against the atheist bus adverts, this time it's one Gerald Warner, blogging at the Daily Telegraph.

I have been conducting research using the fruit fly Drosophila melanogaster since I started my PhD in 1982.  In that time I have imported countless consignments of fly strains through the post and by courier (such as Federal Express).  On only  one occasion can I recall having difficulty getting them through customs - a box of female-sterile mutants from France got stuck, and was in a frightful state when they arrived (this was during my PhD).

The general practise is for the sender to affix one of those green customs tags, asserting that the contents are a gift, of no commercial value (typically $1 may be quoted), that they are live insects, but not an agruicultural pest or a vector of disease.  So for over 26 years as a practising Drosophila geneticist, I've had but one case where this has presented a problem.

It's all got rather Kafka-esque as I try to resolve the ongoing Drosophila importation crisis!  It transpires that the people who have decided that importation of Drosophila should be covered by legislation aimed quite properly at preventing the import of diseased farm animals are a subsidiary of Defra (the Department for Environment, Food and Rural Affairs) called Animal Health.

Now clearly these people have a vitally important job, particularly in light of recent outbreaks of bluetongue, foot and mouth and the potential threat of avian influenza (to which we can add the problems currently afflicting honey bees).  But nowhere on their website do I see indication of why they feel they need to hold up my harmless flies, which are not an agricultural pest, transmit no disease, are not harmful, and in any case would be unable to survive outdoors anyway.  To add to that list of characteristics, these are weak strains carrying recessive lethal mutations.  This is how they describe themselves and their responsibilities:

Over the weekend I've been playing around with Wordpress, having set up a blog over at wordpress.com, where you can set up a blog spectacularly quickly (as you can over with Google's blogger.com).  As a fairly experienced Joomla! user, I found the hosted blog slightly restrictive (for example I would have to pay a daily rate of $0.04 just to be able to edit the theme's css file).

I ended up doing a test installaion on my notebook, firstly using a dedicated database, then trying out incorporating its database within my main Joomla! database.  It turns out to be pretty straightforward to migrate content (though I imagine one would exceed the import limit quite quickly on an active blog).

The Chairperson of the Complementary and Natural Healthcare Council has announced an alternative therapy 'crackdown', according to the BBC news. How interesting:

It will not judge clinics on whether therapies are effective, but rather on whether they operate a professional and safe business.

The Windows Internet Explorer (Pre-Release Beta 2 Version 8) Privacy Statement makes for interesting reading.  Some excerpts follow (emphasis mine)

Suggested Sites

I reported the other day (BBC gifting private data to a USA-based company) that the BBC were using a cookie-based method to send off your browsing history at their website to a company based in the USA, Omniture.  It now turns out that several other companies are doing similar data transfer, though not using cookies.  Annoyingly, the list includes The Guardian.

In that thread, there are instructions on how to block transfer of this data: for Windows, and Linux.  Another contribution to that thread offers this crontab based approach for Linux, while there are observations for Vista users.  I think an approach for Macs will be forthcoming.

Via the excellent Pharyngula blog, I came across this ridiculous article by Bryan Appleyard in The Times:  For God's sake, have Charles Darwin's theories made any difference to our lives? - published on 11th January (so I got to it a little late - I'm more of a Guardian reader!).

Yes, Bryan, they have made a difference, and not the spurious negative ones you build up to in your article.  To be charitable, one must suppose the point of Appleyard's article is to point out that many (usually from the under-educated religious wing) do not accept evolution by natural selection (and I come back to the difference between comment and reportage later).

Picked this one up via Ben Goldacre's Bad Science miniblog, in turn linking to the Daily Mirror's site, where an article by some investigative journalists questions the efficacy of Ecoflow magnets.

It's a pretty straightforward debunking of the claims that these magnets when strapped onto fuel pipes improve fuel efficiency, cutting costs by 5-20%.  Similar devices, marketed as Bioflow are claimed to be benficial for arthritis sufferers.  Amusingly the company leaves any such claims to its network of distributors following a ruling from the Advertising Standards Authority:

Now, another protest against the atheist bus, this time from a christian bus driver, who is taking exception to the phrase "There's probably no god...".

The bus company apparently will endeavour to ensure that Mr Heather won't have to drive one of these buses.  So, I suppose end of story.  Except of course, I spend much of my atheist existence being popped at by bizarre religious ramblings, not least via my morning radio listening, which is invariably polluted by "Thought for the Day".  If you are really keen to listen, you can do so here.

According to The Register (IWF confirms Wayback Machine porn blacklisting), explanation of the loss of access to the internet archive to customers of some UK ISPs is due to an IWF blacklist, containing URLs contained within that archive.

The Register asked the IWF what URLs were blacklisted, who at the ISPs were responsible for implementing the blacklist, and why ISPs were blocking the whole archive, but the IWF refuse to comment on the URLs on the blacklist (it's their policy), and refused to (or were unable to) answer the other questions.

I picked up on this new blog at ScienceBlogs - "Blogging the Origin" via Science's Origins blog.  In this blog, science writer and evolutionist John Whitfield, who bravely admits to never having read The Origin of Species before, is conducting a book club cum blog as he reads the text, chapter by chapter in this anniversary year.  As I write, he's covered the Introduction and Chapters 1 and 2, with the next instalment due on Friday.  He plans to finish in time to celebrate Darwin's 200th birthday.

I haven't read The Origins since I was a teenager (which is an upsettingly long time ago), and this has inspired me to read it again.  But which version?   The old Pelican paperback edition I read all those years ago is a later edition of the tome, while the edition reprinted in the compilation From So Simple a Beginning", edited by E. O. Wilson, is I think the first edition (but lacks a certain portability - the volume also has Voyage of the Beagle, Descent of Man and The Expression of Emotions, all in a hardback binding).  Perhaps I should limit myself to the 1858 pair of papers by Darwin and Wallace?